Preview

The Quilt catalog renders previews of the following file types. Whenever possible, Quilt streams the smallest possible subset of the data needed to generate the preview.
Previews are supported for uncompressed files as well as for gzip archives (.gz).
Plain text previews
Quilt can display any plaintext file format, including the following.
Most programming languages, with syntax highlighting (.cpp, .json, .js, .py, .sh, .sql, etc.)
Biological file formats (.bed, .cef, .gff, .fasta, .fastq, .sam, .pdbqt, .vcf, etc.)
Text files (.csv, .md, .readme, .tsv, .txt, etc.)
Chemical structures
The Quilt catalog uses the NGL Viewer library to render structures. By default, v3000 Molfiles are converted to v2000 by the JavaScript client for rendering.
The following file formats are supported:
Mol files (.mol, .mol2, .sdf)
.cif
.ent
.pdb
Binary and special file format previews
Excel (.xls, .xlsx)
FCS Flow Cytometry files (.fcs)
Images (.gif, .jpg, .png, .tif, .tiff, etc.)
Media (.mp4, .webm, .flac, .m2t, .mp3, .mp4, .ogg, .ts, .tsa, .tsv, .wav)
.ipynb (Jupyter and Voila dashboards)
.parquet
Advanced: Quilt Package File Server
The Quilt Catalog supports secure, custom Javascript-enabled visualizations and dashboards embedded inside iframes (Package File Server). It is at your discretion which JS library (or libraries) you wish to import in your HTML file.
To enable "permissive" visualizations, check the Enable permissive HTML rendering checkbox in Bucket settings. Please note that rendering Javascript-enabled HTML files in your S3 bucket or Quilt package creates a short-lived publicly available session for the lifetime of the session, although all session traffic remains encrypted.
Example
1.report.html is a file that includes a publicly available JS library and custom embedded script.
2.Opening report.html generates a new session temporary-session-id.
3.The file is served from the iframe relative-path /temporary-session-id/report.html.
4.All relative media and scripts are rendered in the same iframe relative-path format:
./img.jpg is served as /temporary-session-id/img.jpg
script.js is served as /temporary-session-id/script.js
All files in the same package are made temporarily publicly-available (for lifetime of the session) under /temporary-session-id, even if not explicitly referenced in report.html.
Live packages
​Dynamic visualizations; interactive IGV dashboard; Perspective datagrids with images​

Last modified 8h ago